Quail Researcher to Lead James Reserve

Jen­nifer Gee, an expert in quail hybridiza­tion, is the new direc­tor of James San Jac­into Moun­tains Reserve. Image credit: cour­tesy Jen­nifer Gee

The James San Jac­into Moun­tains Reserve has a new direc­tor in biol­o­gist Jen­nifer Gee. Since grad­u­ate school, Gee’s work has taken her from the green forests of Mass­a­chu­setts to the deserts of north­ern Mex­ico, and the flasks and chem­i­cals of the lab­o­ra­tory to the wilds of the Gala­pa­gos Islands. Now she plans to apply her years of field expe­ri­ence to help classes and sci­en­tists vis­it­ing Black Moun­tain in South­ern California.

Gee first encoun­tered the Nat­ural Reserve Sys­tem as a Prince­ton Uni­ver­sity grad­u­ate stu­dent. She came west to study hybridiza­tion pat­terns between two closely related bird species, Gambel’s quail (Cal­lipepla gam­be­lii) and Cal­i­for­nia quail (Cal­lipepla cal­i­for­nica). She found both bird species in abun­dance at the NRS’s Boyd Deep Canyon Desert Research Cen­ter, which became the site of her the­sis work. Spend­ing roughly five months of the year over five years in the Coachella Val­ley desert and the Santa Rosa Moun­tains, Gee says, “I fell in love with that place and those birds.”

After grad­u­a­tion, she took a posi­tion as a post­doc­toral fel­low at Cor­nell Uni­ver­sity, then Har­vard Uni­ver­sity. She focused her research on a species of Darwin’s finches called the war­bler finch, com­par­ing it with a rel­a­tive called the bananaquit. Addi­tional field­work in the Gala­pa­gos and Bar­ba­dos allowed her to study beak devel­op­ment. Gee also con­ducted exper­i­ments with the Java finch at Harvard’s Con­cord Field Station.

The range of the Cal­i­for­nia quail (above) over­laps with that of Gambel’s quail. Gee’s stud­ies of when these birds inter­breed help illu­mi­nate mech­a­nisms dri­ving spe­ci­a­tion and evo­lu­tion. Image credit: Jen­nifer Gee
It was a fas­ci­nat­ing detour which reshaped my view of evo­lu­tion, but I was both­ered by per­sis­tent ques­tions that I had left unan­swered about the ori­gin of quail and how each of the Cal­lipeplaquail species had formed. My grad­u­ate field work had made me feel like I was just get­ting a han­dle on that sys­tem,” Gee says.

She resumed her quail work with col­lab­o­ra­tor Jen­nifer Calkins. To raise money for their research, the sci­en­tists used a quin­tes­sen­tially mod­ern approach: social media. They designed a series of donor gifts rang­ing from quail trad­ing cards to T-shirts, and pitched their project on Kickstarter.com, an online fundrais­ing plat­form. Their efforts raised almost $5,000. The money enabled Gee and Calkins to travel to Mex­ico and for Gee to inves­ti­gate yet another hybridiza­tion fron­tier, this time between Gambel’s and ele­gant quail (Cal­lipepla dou­glasii).

Dur­ing this period, Gee served as interim man­ager of the Bernard Field Sta­tion, adja­cent to and owned by the Clare­mont Col­leges. The posi­tion allowed her to relaunch her quail project, and gave her expe­ri­ence man­ag­ing a field station.

There, Gee expe­ri­enced an epiphany. “Direct­ing a field sta­tion felt like my call­ing in life,” Gee says. When for­mer James Reserve direc­tor Becca Fen­wick departed to become direc­tor of the NRS’s Yosemite Field Sta­tion, Gee leaped at the chance to apply for the position.

Jen­nifer brings a wealth of aca­d­e­mic and prac­ti­cal expe­ri­ence to the NRS,” says Allan Muth, direc­tor of the NRS’s Boyd Deep Canyon Reserve. “She is a sea­soned field biol­o­gist with lab­o­ra­tory cre­den­tials and she under­stands the inte­gra­tion of field and lab sci­ence. In addi­tion, she has man­age­ment expe­ri­ence at a field sta­tion that will enable her to com­fort­ably assume her respon­si­bil­i­ties at the James Reserve.”

Gee couldn’t be hap­pier to entwine her fate with that of the James Reserve. “The James Reserve turned out to be the chance of a life­time. It is just a few kilo­me­ters from a place and com­mu­nity that I unwit­tingly made my home and clearly knew some­how I had to go back to. It’s such a happy end­ing and true beginning.”

Related Links

Quail Hybridiza­tion in Mex­ico, Sci­en­tist At Work series, New York Times

The Quail Diaries: sci­ence, cul­ture & quail

Engineering Aid for Reserves

quadcopterThe quad­copter takes to the air at Blue Oak Ranch Reserve. Image credit: Michael Hamilton

Enter­pris­ing UC Berke­ley engi­neer­ing stu­dents have gone into the spy busi­ness. Over the past semes­ter, they have devel­oped two com­pact, remote-controlled air­craft. The pur­pose of these fly­ing machines: to keep tabs on UC Nat­ural Reserves.

You might think Nat­ural Reserve Sys­tem (NRS) sci­en­tists would be look­ing over their shoul­ders in fear. Instead, they’re thrilled at the prospect of hav­ing elec­tronic eyes hov­er­ing overhead.

By next year, the sci­en­tists hope to col­lect sci­en­tific data with the air­craft. The devices will observe hard to reach cor­ners of the NRS’s Angelo Coast Range and Blue Oak Ranch reserves.

The fly­ing machines are the fruits of col­lab­o­ra­tion between the NRS and Berkeley’s engi­neer­ing depart­ment. Instruc­tor George Anwar learned about the needs of NRS sci­en­tists from engi­neer­ing pro­fes­sor Paul Wright, who also serves as direc­tor of the Cen­ter for Infor­ma­tion Tech­nol­ogy Research in the Inter­est of Soci­ety (CITRIS). The NRS had cospon­sored a work­shop the pre­vi­ous fall with CITRIS where field sci­en­tists described research prob­lems that could be addressed with bet­ter technology.

The quadcopter’s view of a pond at Blue Oak Ranch Reserve. Image credit: cour­tesy Michael Hamilton

Engi­neer­ing stu­dents, Anwar real­ized, could bridge that gap. His course requires stu­dents to develop a final course project. That project could be tech­nol­ogy tailor-made for the NRS.

Anwar believed work­ing with the NRS would be a prime oppor­tu­nity for stu­dents. “These prob­lems bring about engi­neer­ing chal­lenges that are not in any text­book,” Anwar says. “The stu­dents have to write pro­pos­als and meet the client’s spec­i­fi­ca­tions. That is a real-world situation.”

Early in the semes­ter, Anwar invited sev­eral NRS sci­en­tists to present their research prob­lems to the class. Michael Hamil­ton, direc­tor of the NRS’s Blue Oak Ranch Reserve, wanted to track sea­sonal phe­nom­ena. These could include the extent of wild­flower blooms, mea­sure­ments of plant green­ness, assess­ments of water lev­els and pond plants, and even bird and squir­rel counts. Such infor­ma­tion helps sci­en­tists mon­i­tor cli­mate change and rela­tion­ships between envi­ron­men­tal con­di­tions and species.

But Blue Oak Ranch Reserve is very large. Hik­ing or dri­ving to the many sites Hamil­ton wants to mon­i­tor could take all day. Hamil­ton hoped for an air­borne cam­era that could record con­di­tions at the same loca­tions over time so he could col­lect this data almost automatically.

Berke­ley biol­ogy pro­fes­sor Mary Power had a sim­i­lar dream. Power researches aquatic food webs at the NRS’s Angelo Coast Range Reserve. Stringy algae grow­ing in the Reserve’s river grad­u­ally changes color from green to rust between spring and late fall. This color change cor­re­sponds to changes in pop­u­la­tions of diatoms that col­o­nize the algae. Diatoms are able to take nitro­gen from the air and incor­po­rate it into their tis­sues. By increas­ing the nutri­ents avail­able in the stream, Power has found, diatoms give aquatic insects the energy boost they need to lay eggs.

To advance this work fur­ther, Power wants to mon­i­tor color changes in algae along the river from spring to sum­mer. This will enable her to deter­mine the level of diatom col­o­niza­tion over a large area, and to cal­cu­late nutri­ent lev­els to improve her food web mod­els. This tech­nique could be used to mon­i­tor changes in aquatic food webs across entire watersheds—critical infor­ma­tion about stream health in an era of dra­matic cli­mate change.

The sci­en­tists inspired two teams of engi­neer­ing stu­dents to step for­ward. For Power, stu­dents pro­posed graft­ing a Sty­ro­foam plane with func­tional pro­pellers to a shark bal­loon that “swims” through the air. The bal­loon would allow the plane to stay aloft for longer and travel at slower speeds, while the plane would help the bal­loon turn and lend it extra thrust. The plane’s built-in cam­era would gather algae color data.

After strap­ping both toys together, the engi­neer­ing stu­dents mod­i­fied their steer­ing mech­a­nisms to work in uni­son. Lastly, they hacked the nav­i­ga­tional sys­tems of the two toys to enable con­trol by a sin­gle remote—a jury-rigged Wii controller.

Power plans to use the diri­gi­ble mostly in spring and sum­mer, over a river shel­tered by stands of mature trees. Helium in the bal­loon and the plane’s pro­pellers should be enough to keep the device in the air for over an hour.

SharkA hybrid balloon-plane diri­gi­ble patrols the air inside Hesse Hall at UC Berke­ley. Image credit: Kath­leen M. Wong

It was an inter­est­ing oppor­tu­nity. You have this inter­fac­ing of two dif­fer­ent fields: researchers who are actu­ally out in the field, who have real-world prob­lems and con­cerns, and mechan­i­cal engi­neers in a class just learn­ing this mate­r­ial,” said William Bulling­ton, a mem­ber of the diri­gi­ble team. All four team mem­bers are look­ing for­ward to mov­ing the project for­ward and apply­ing it to a real prob­lem even after class ends.

Hamil­ton wanted a more robust device able to with­stand weather and winds for years. Because sturdy air­craft are expen­sive, Hamil­ton bought the parts using reserve funds.

The fin­ished quad­copter roughly resem­bles a lug wrench with pro­pellers on all four arms. Light­weight yet pow­er­ful, this quad­copter car­ries a dig­i­tal cam­era, a sophis­ti­cated micro­con­troller, and a global posi­tion­ing sys­tem (GPS) unit. Future stu­dent groups will be asked to pro­gram it to travel to cer­tain loca­tions using GPS-linked maps.

The quad­copter team was equally eager to apply their skills to ben­e­fit NRS sci­ence. “The fact that we were going to build some­thing that would be used in the real world was very excit­ing for us. We wanted to make it amaz­ing so the nat­ural reserve would have some­thing right away that they could use,” said team mem­ber Andrew Deng.

NRS sci­en­tists are pleased with the results of the part­ner­ship. “This effort was well worth work­ing with the class. As a first start I am pleased to have a unit that flew, can sus­tain flight long enough to col­lect high-definition imagery, achieves the desir­able alti­tude, and will serve as a plat­form for fur­ther improve­ment in suc­ces­sive pro­to­typ­ing classes,” Hamil­ton says.

The part­ner­ship with the NRS could become a reg­u­lar fix­ture of the engi­neer­ing depart­ment, instruc­tor Anwar says. “Even­tu­ally we might even start form­ing a stu­dent club that does this. Around here, there’s always a group that likes the out­doors and hik­ing, and to be able to tie engi­neer­ing to this is just wonderful.”